Natural scienceBioinformaticsBioinformatics algorithmsAlignment algorithms

Pseudoalignment

Kallisto time

Report a typo

How does kallisto work? Sort the steps according to the order they were given in a topic.

Put the items in the correct order
Kallisto does Indexing
Reads get split in k-mers to find the location on T-DBg
Each k-mer gets a k-compatibility class assigned
Kallisto constructs a T-DBG
An intersection of all k-mer k-compatibility classes is calculated to find a compatible transcript

Create a free account to access the full topic