Natural scienceBioinformaticsBioinformatics algorithmsAlignment algorithms

Pseudoalignment

The name

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Why Pseudoalignment is called PSEUDOalignment?

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It's not an alignment, but rather a comparison of sequences with the 'database' of short sequences

It's not a classical alignment; here, we're aligning short sequences against one big one

It's a 'reverse' alignment, where nucleotides are compared to aminoacids

It used to be an alignment method, but not anymore

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